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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs28563911 chr5:176714943 T/C LOC388955 chr2:63849182-63850159:- 0.76 7.08 4.9E-11 Box Plot
UCEC rs28580074 chr5:176721198 T/C LOC388955 chr2:63849182-63850159:- 0.76 7.08 4.9E-11 Box Plot
UCEC rs28628134 chr5:176714569 G/A LOC388955 chr2:63849182-63850159:- 0.76 7.08 4.9E-11 Box Plot
UCEC rs28684504 chr5:176727438 T/C LOC388955 chr2:63849182-63850159:- 0.75 7.17 3.02E-11 Box Plot
UCEC rs28715668 chr5:176699268 T/C LOC388955 chr2:63849182-63850159:- 0.74 7.08 5.11E-11 Box Plot
UCEC rs324128 chr6:44212311 T/C HSP90AB2P chr4:13335038-13340281:+ 0.64 8.1 1.68E-13 Box Plot
UCEC rs34124063 chr6:44215784 A/T HSP90AB2P chr4:13335038-13340281:+ 0.7 8.91 1.45E-15 Box Plot
UCEC rs34140900 chr2:189133856 T/C GAGE2E chrX:49197607-49204923:+ 0.45 6.97 8.88E-11 Box Plot
UCEC rs34375352 chr9:3716564 C/G MYF5 chr12:81110691-81113452:+ 0.48 8.26 6.66E-14 Box Plot
UCEC rs34451930 chr6:44215786 A/G HSP90AB2P chr4:13335038-13340281:+ 0.7 8.91 1.45E-15 Box Plot
UCEC rs34489147 chr9:3729644 A/G MYF5 chr12:81110691-81113452:+ 0.43 7.57 3.28E-12 Box Plot
UCEC rs34594826 chr9:3720648 C/T MYF5 chr12:81110691-81113452:+ 0.5 8.48 1.84E-14 Box Plot
UCEC rs34789835 chr6:44215785 G/C HSP90AB2P chr4:13335038-13340281:+ 0.7 8.91 1.45E-15 Box Plot
UCEC rs35060323 chr2:189129663 G/A GAGE2E chrX:49197607-49204923:+ 0.45 6.97 8.88E-11 Box Plot
UCEC rs351862 chr5:176541370 C/T LOC388955 chr2:63849182-63850159:- -0.77 -7.33 1.24E-11 Box Plot